BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022E02LP1|AL427905
(379 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig334 637 0.0
>3x_Contig334
Length = 1160
Score = 637 bits (321), Expect = 0.0
Identities = 345/349 (98%), Gaps = 3/349 (0%)
Strand = Plus / Minus
Query: 1 atagttttaattaacttaccccccgcggcacacccaaccctacggttgggtgaggccgcg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 372 atagttttaattaacttaccccccgcggcacacccaacc-tacggttgggtgaggccgcg 314
Query: 61 gggggaatctatatataagttaatagtagttatattagctcaattggtagagcgttcgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gggggaatctatatataagttaatagtagttatattagctcaattggtagagcgttcgtt 254
Query: 121 ttgtaatcgaaaggtttgtgagttcgaatctctaatataacagaccttatcgtctaatgg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ttgtaatcgaaaggtttg-gagttcgaatctctaatataacagaccttatcgtctaatgg 195
Query: 181 ttacgacatcatctcttcatgttgaaaatatcggttcaattccgattaaggttatatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ttacgacatcatctcttcatgttgaaaatatcggttcaattccgattaaggttatatatt 135
Query: 241 tt-ataatcccttctcccccgcgacatgaccctcataaagggtcatgtcgcgggggctgg 299
|| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 134 ttcataatcccttctcccccgccacatgaccctcataaagggtcatgtcgcgggggctgg 75
Query: 300 atatattaccaagtatatccgtgggatatattagaagtaatatataatt 348
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atatattaccaagtatatccgtgggatatattagaagtaatatataatt 26
Score = 101 bits (51), Expect = 9e-22
Identities = 90/103 (87%)
Strand = Plus / Plus
Query: 3 agttttaattaacttaccccccgcggcacacccaaccctacggttgggtgaggccgcggg 62
||||||||||||||||||||| | || ||| |||||||||||||| |||||||||||
Sbjct: 478 agttttaattaacttaccccctgggggacaaccaaccctacggtttggtgaggccgcttt 537
Query: 63 gggaatctatatataagttaatagtagttatattagctcaatt 105
|||||| ||||||||||| |||| |||||| |||| |||||||
Sbjct: 538 gggaatttatatataagtaaatattagttaaattatctcaatt 580
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3007
Number of Sequences: 1807
Number of extensions: 3007
Number of successful extensions: 168
Number of sequences better than 1.0e-20: 1
length of query: 379
length of database: 10,358,551
effective HSP length: 16
effective length of query: 363
effective length of database: 10,329,639
effective search space: 3749658957
effective search space used: 3749658957
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)